Citrobacter sp. 50677481

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter sp. 50677481 is a gram-negative bacterium characterized by its rod-shaped morphology. This species possesses flagella, indicating motility, which may play a role in its ecological interactions and potential adaptability in various environments. The strain is noted to have a single replicon, which is indicative of its genomic organization. The accession number for Citrobacter sp. 50677481 is LNHZ00000000.1, which can be used for further reference in genomic databases. This identification aids in the classification and study of its genetic features, which may contribute to understanding its metabolic pathways and ecological roles. In terms of its ecological implications, the presence of flagella suggests that Citrobacter sp. 50677481 may be capable of moving through diverse environments, potentially impacting its interactions with other microorganisms and its ability to colonize different niches. As a member of the Citrobacter genus, it may also be involved in nutrient cycling and could have significance in various ecosystems. Overall, the traits of Citrobacter sp. 50677481 highlight its potential ecological versatility and importance within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter sp. 50677481
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter sp. 50677481
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter sp. 50677481 contig9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1152142 bp

Thymine Count

1156917 bp

Guanine Count

1362311 bp

Cytosine Count

1377163 bp

Genome Length

5048533 bp

Protein-coding Genes

4396 genes

Non-Coding Genes

418 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
regulatorAPU02_24205Not AvailableNegative5023163 - 502371420624.0
transcriptional regulatorAPU02_24210Not AvailableNegative5023711 - 502431922812.0
transglycosylaseAPU02_24215Not AvailableNegative5024330 - 502486319354.0
nucleotide excision repair proteinAPU02_24220Not AvailableNegative5024863 - 502513510517.7
permeaseAPU02_24225Not AvailablePositive5025851 - 502621313361.5
conjugal transfer protein tragAPU02_24230Not AvailableNegative5026251 - 5029865127853.0
conjugal transfer protein trahAPU02_24235P15069Negative5029878 - 503131151262.9
conjugal transfer protein trafAPU02_24240Not AvailableNegative5031313 - 503235339025.4
dna helicaseAPU02_24245F1ND48Negative5032464 - 503397557416.7
hypothetical proteinAPU02_24250Not AvailableNegative5033984 - 503426210808.9

Displaying genes 4791 – 4800 of 4814 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

317 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000433malonateC3H2O4Chemical structure of malonateNot available
Average102.0456Da
Monoisotopic101.9953086Da

Displaying 1–10 of 317 metabolites

Health Effects

No health effects information available for this bacterium.