Achromobacter sp. Root170

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Achromobacter

Description

Achromobacter sp. Root170 is a notable species within the Achromobacter genus, characterized by the presence of flagella, which suggests motility and potential adaptability to various environments. This trait may play a significant role in the organism's ecological interactions and its ability to colonize different niches. The genome of Achromobacter sp. Root170 consists of a single replicon, indicating a streamlined genetic organization that can facilitate efficient replication and possibly rapid adaptation to environmental changes. The genome is documented under the accession number LMHN00000000.1, which provides a reference for researchers interested in studying its genetic makeup and functions. The presence of flagella is particularly relevant in the context of microbial ecology, as motility can enhance the organism’s ability to explore and exploit its surroundings. This capability may contribute to its role in various ecosystems, potentially including soil health, bioremediation, or interactions with plant roots. In summary, Achromobacter sp. Root170, with its flagella and singular replicon, presents intriguing possibilities for understanding microbial dynamics in its environment. Its motility may allow it to engage in significant ecological processes, highlighting the importance of such traits in microbial life and ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusAchromobacter
SpeciesAchromobacter sp. Root170
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Achromobacter sp. Root170


Gene Summary

Adenine Count

980516 bp

Thymine Count

997928 bp

Guanine Count

1949528 bp

Cytosine Count

1883001 bp

Genome Length

5811388 bp

Protein-coding Genes

5182 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5s ribosomal rnaNot AvailableNot AvailablePositive106 - 218Not Available
16s ribosomal rnaNot AvailableNot AvailablePositive152 - 1693Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive238 - 349Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive388 - 500Not Available
Trna-ileNot AvailableNot AvailablePositive1822 - 1898Not Available
Trna-alaNot AvailableNot AvailablePositive1923 - 1998Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive2289 - 5198Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive5383 - 5495Not Available
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive6329 - 6734Not Available
fis family transcriptional regulatorASD87_00030P13632Negative5752 - 712250719.2

Displaying genes 1 – 10 of 5243 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

336 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000368(1S,2R)-3-methylcyclohexa-3,5-diene-1,2-diolC7H10O2Chemical structure of (1S,2R)-3-methylcyclohexa-3,5-diene-1,2-diolNot available
Average126.155Da
Monoisotopic126.068079562Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da

Displaying 1–10 of 336 metabolites

Health Effects

No health effects information available for this bacterium.