Leifsonia sp. Root112D2

Bacilli

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Leifsonia

Description

Leifsonia sp. Root112D2 is a bacterial strain characterized by its bacilli shape. This morphological feature is significant as it influences the bacterium's physiology and ecological interactions. The strain is noted for having a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability in various environments. The accession number for Leifsonia sp. Root112D2 is LMCU00000000.1, providing a reference point for genetic and genomic studies. This accession allows researchers to access the complete genomic data, facilitating further exploration of its genetic makeup and potential functionalities. Bacteria within the Leifsonia genus have been studied for their roles in various ecological niches, particularly in relation to plant interactions. Given the designation "Root112D2," this strain may be associated with a root environment, suggesting a potential involvement in plant-microbe interactions. Such interactions can be crucial for nutrient cycling, soil health, and plant growth promotion. In summary, Leifsonia sp. Root112D2, with its bacilli shape and single replicon, represents a unique bacterial entity that may play a significant role in its ecological niche, particularly in relation to plant root systems. Understanding its characteristics may provide insights into its ecological functions and applications in agriculture or soil management.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusLeifsonia
SpeciesLeifsonia sp. Root112D2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeBacilli
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Leifsonia sp. Root112D2 contig_2, whole genome shotgun sequence.

Gene Summary

Adenine Count

588389 bp

Thymine Count

584191 bp

Guanine Count

1116257 bp

Cytosine Count

1117774 bp

Genome Length

3406696 bp

Protein-coding Genes

3046 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridine nucleotide-disulfide oxidoreductaseASC63_00110Not AvailablePositive24939 - 2639050440.8
fe-s oxidoreductaseASC63_00115Not AvailablePositive26387 - 2677914684.8
short-chain dehydrogenaseASC63_00120Not AvailablePositive26776 - 2763029628.5
hypothetical proteinASC63_00125Not AvailableNegative27827 - 2829116258.3
amidaseASC63_00130Not AvailableNegative28407 - 2983150274.8
gntr family transcriptional regulatorASC63_00135Not AvailablePositive29943 - 3030213129.8
abc transporter atp-binding proteinASC63_00140Not AvailablePositive30299 - 3120433175.7
hypothetical proteinASC63_00145Not AvailablePositive31210 - 3198328207.6
phosphinothricin acetyltransferaseASC63_00150Not AvailableNegative32030 - 3260821819.5
uracil-dna glycosylaseASC63_00155Not AvailableNegative32698 - 3339624645.5

Displaying genes 21 – 30 of 3095 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.