Rhizobium sp. Leaf311

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. Leaf311 is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This species is notable for having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in specific environments. The genomic data for Rhizobium sp. Leaf311 is accessible under the accession number LMNZ00000000.1, which provides a basis for further studies and comparisons with other members of the Rhizobium genus. Ecologically, Rhizobium species are well-known for their symbiotic relationships with leguminous plants, where they form nodules and fix atmospheric nitrogen, thus enhancing soil fertility. The ability of Rhizobium sp. Leaf311 to engage in such interactions may have significant implications for agricultural practices, particularly in sustainable farming systems that rely on biological nitrogen fixation to reduce the need for chemical fertilizers. The presence of flagella suggests that Rhizobium sp. Leaf311 can effectively navigate its environment, potentially influencing its colonization of plant roots and its overall ecological role in promoting plant health and soil quality.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. Leaf311
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp. Leaf311
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp. Leaf311


Gene Summary

Adenine Count

1031137 bp

Thymine Count

1045927 bp

Guanine Count

1391225 bp

Cytosine Count

1373618 bp

Genome Length

4847754 bp

Protein-coding Genes

4353 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Large packaging proteinASF69_14580Not AvailablePositive1803413 - 180467546421.6
Hypothetical proteinASF69_14585Not AvailablePositive1805092 - 180570022563.8
stress responsive proteinASF69_14590Not AvailablePositive1805794 - 180610211414.4
Portal proteinASF69_14595Q1RIH4Positive1806185 - 180734842260.3
hypothetical proteinASF69_14600Not AvailablePositive1807504 - 180782411096.7
Putative prohead proteaseASF69_14605Not AvailablePositive1807869 - 180844121132.4
Major capsid proteinASF69_14610Not AvailablePositive1808488 - 180975945505.1
Dna packaging/head-tail-connectorASF69_14615Not AvailablePositive1809866 - 181043520693.9
Head closure proteinASF69_14620Not AvailablePositive1810439 - 181077412281.6
hypothetical proteinASF69_14625Not AvailablePositive1810771 - 181117214480.8

Displaying genes 1 – 10 of 4433 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

267 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 267 metabolites

Health Effects

No health effects information available for this bacterium.