Rhodococcus sp. Leaf278

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. Leaf278 is a notable bacterium characterized by the presence of flagella, which suggests it possesses motility capabilities. This trait allows the organism to potentially navigate through various environments, enhancing its ability to colonize and thrive in diverse ecological niches. The genome of Rhodococcus sp. Leaf278 comprises a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in metabolic processes. This characteristic is particularly relevant for bacteria in dynamic environments, where rapid responses to changing conditions are advantageous. The organism is cataloged under the accession number LMRR00000000.1, which serves as a reference for researchers seeking to access its genomic data and further understand its biological functions and interactions within its environment. Rhodococcus species are known for their metabolic versatility, and while specific metabolic pathways for Leaf278 are not detailed here, the presence of flagella and a single replicon may suggest an ecological role in biodegradation or bioremediation. This adaptability could allow Rhodococcus sp. Leaf278 to participate in nutrient cycling and interact with various microbial communities in its habitat, contributing to its ecological significance.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. Leaf278
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. Leaf278 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1023899 bp

Thymine Count

1030576 bp

Guanine Count

1837760 bp

Cytosine Count

1829308 bp

Genome Length

5721797 bp

Protein-coding Genes

5184 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glucarate dehydrataseASG84_11770Not AvailableNegative5245273 - 524654145130.9
5-dehydro-4-deoxyglucarate dehydrataseASG84_11775Not AvailableNegative5246541 - 524746732197.7
2,5-dioxovalerate dehydrogenaseASG84_11780Not AvailableNegative5247499 - 524909754680.4
glucarate dehydrataseASG84_11785Not AvailablePositive5249384 - 525073048697.5
hydroxyacid dehydrogenaseASG84_11790Not AvailablePositive5250691 - 525168335159.8
mandelate racemase/muconate lactonizing proteinASG84_11795Not AvailablePositive5251755 - 525295443328.0
hypothetical proteinASG84_11800Not AvailableNegative5252971 - 525423945100.4
atpaseASG84_11805Not AvailablePositive5254527 - 525584046278.6
potassium transporterASG84_11810Not AvailablePositive5255833 - 525649823885.7
mannitol dehydrogenaseASG84_11815Not AvailableNegative5256482 - 525795754339.2

Displaying genes 4831 – 4840 of 5259 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.