Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf194 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1391274 bp
Thymine Count
1386351 bp
Guanine Count
894564 bp
Cytosine Count
900879 bp
Genome Length
4573096 bp
Protein-coding Genes
3909 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pectate lyase | ASG14_18105 | Not Available | Positive | 4418012 - 4418989 | 37059.1 |
| altronate oxidoreductase | ASG14_18110 | Q97L67 | Positive | 4419022 - 4420533 | 56724.8 |
| altronate hydrolase | ASG14_18115 | O34673 | Positive | 4420536 - 4422182 | 59619.0 |
| glucuronate isomerase | ASG14_18120 | A5FC03 | Positive | 4422299 - 4423699 | 53901.8 |
| carbohydrate kinase | ASG14_18125 | Q53W83 | Positive | 4423813 - 4424862 | 38645.1 |
| ketohydroxyglutarate aldolase | ASG14_18130 | Not Available | Positive | 4424862 - 4425521 | 24030.6 |
| mfs transporter | ASG14_18135 | Not Available | Positive | 4425541 - 4426980 | 53474.9 |
| aldehyde dehydrogenase | ASG14_18140 | Q3C1A6 | Positive | 4427078 - 4428703 | 60253.8 |
| gntr family transcriptional regulator | ASG14_18145 | O31523 | Negative | 4428813 - 4429553 | 27079.0 |
| pectin esterase | ASG14_18150 | Q9LXD9 | Negative | 4429550 - 4430587 | 38508.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

