Rhodococcus sp. Leaf7

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. Leaf7 is a notable bacterium characterized by the presence of flagella, which suggests a degree of motility that may facilitate its ecological interactions. This species is represented in genomic databases by the accession number LMRI00000000.1, providing a reference point for further research and characterization. The organism has a single replicon, indicating a simplified genomic architecture that may influence its replication and genetic stability. This trait can be advantageous in specific environmental contexts where rapid adaptation or resilience is necessary. Rhodococcus species are generally recognized for their versatility in degrading a wide range of organic compounds, which may play a significant role in bioremediation processes. The motility conferred by flagella may enhance Rhodococcus sp. Leaf7's ability to navigate through various substrates in diverse environments, potentially increasing its effectiveness in breaking down pollutants. In summary, Rhodococcus sp. Leaf7 exhibits motility through flagella and possesses a single replicon, traits that may contribute to its ecological role, particularly in the degradation of organic material. This bacterium's capabilities may offer significant insights into its application in bioremediation efforts, emphasizing the ecological importance of microbial diversity in maintaining environmental health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. Leaf7
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. Leaf7 contig_7, whole genome shotgun sequence.

Gene Summary

Adenine Count

747916 bp

Thymine Count

743252 bp

Guanine Count

1508006 bp

Cytosine Count

1537622 bp

Genome Length

4536885 bp

Protein-coding Genes

4067 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glyoxalaseASG56_01535Not AvailableNegative349547 - 34992113342.6
hypothetical proteinASG56_01540Not AvailablePositive350053 - 35084428489.2
hypothetical proteinASG56_01545Not AvailableNegative350826 - 35177933383.9
hypothetical proteinASG56_01550Not AvailableNegative351826 - 35236819718.8
hydrolaseASG56_01555Q8K4F5Negative352453 - 35321127098.4
dna polymerase ivASG56_01560Q98JM5Negative353224 - 35446244022.8
dna polymeraseASG56_01565Not AvailableNegative354459 - 35604555897.5
hypothetical proteinASG56_01570P9WKZ8Negative356042 - 35689329206.4
serine/threonine protein kinaseASG56_01575P54744Positive357040 - 35826042806.8
hypothetical proteinASG56_01580Not AvailableNegative358374 - 35934533226.2

Displaying genes 301 – 310 of 4117 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

384 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da

Displaying 1–10 of 384 metabolites

Health Effects

No health effects information available for this bacterium.