Planktothrix sp. PCC 11201

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Oscillatoriales

Family

Microcoleaceae

Genus

Planktothrix

Description

Planktothrix sp. PCC 11201 is a cyanobacterium characterized by a single replicon, indicating its genomic structure is streamlined and efficient. The organism is cataloged under the accession number CZCT00000000.2, which provides a reference for genomic studies and further research into its biology. Cyanobacteria like Planktothrix sp. PCC 11201 are known for their role in aquatic ecosystems, particularly in terms of primary production and nitrogen fixation. Their ability to perform photosynthesis allows them to contribute significantly to the biomass of freshwater environments. Additionally, they can influence the nutrient dynamics within these ecosystems, often impacting the overall health and stability of aquatic habitats. The presence of a single replicon in Planktothrix sp. PCC 11201 may suggest adaptations that enhance its survival and competitiveness in fluctuating environmental conditions. This trait could also facilitate quicker responses to changes in nutrient availability or light conditions, which are critical for maintaining dominance in its ecological niche. Overall, the genomic simplicity of Planktothrix sp. PCC 11201, as indicated by its single replicon, along with its ecological roles, underscores its importance in freshwater ecosystems. Understanding its genetic makeup and functional capabilities can provide insights into the ecological dynamics of cyanobacterial populations and their interactions within aquatic environments.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderOscillatoriales
FamilyMicrocoleaceae
GenusPlanktothrix
SpeciesPlanktothrix sp. PCC 11201
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatbenthic
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Planktothrix sp. PCC 11201 isolate BBR_PRJEB10991 genome assembly,

Gene Summary

Adenine Count

1787115 bp

Thymine Count

1783485 bp

Guanine Count

1196263 bp

Cytosine Count

1198112 bp

Genome Length

5965039 bp

Protein-coding Genes

5144 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
high-affinity branched-chain amino acid transport protein (abc superfamily, atp-binding)PL11201_80397Not AvailablePositive5798976 - 579967725565.5
putative transcription regulator with hth domainPL11201_80398Not AvailablePositive5799689 - 580008714985.1
conserved hypothetical proteinPL11201_80399Not AvailableNegative5800100 - 580093030278.6
conserved hypothetical proteinPL11201_80400Not AvailableNegative5801013 - 580331984661.4
conserved hypothetical proteinPL11201_80401Not AvailableNegative5803553 - 58037597950.36
putative plasmid maintenance system antidote protein, xre familyPL11201_80402Not AvailableNegative5803863 - 580416511436.7
toxin higb-1PL11201_80403Not AvailableNegative5804171 - 580445511010.2
abc-type transporter, periplasmic subunit family 3PL11201_80404Not AvailableNegative5804680 - 580557632500.2
conserved exported hypothetical proteinPL11201_80405Not AvailablePositive5805649 - 580600812569.0
conserved exported hypothetical proteinPL11201_80406Not AvailablePositive5806159 - 580650912337.4

Displaying genes 5061 – 5070 of 5205 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.