Planktothrix sp. PCC 11201

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Oscillatoriales

Family

Microcoleaceae

Genus

Planktothrix

Description

Planktothrix sp. PCC 11201 is a cyanobacterium characterized by a single replicon, indicating its genomic structure is streamlined and efficient. The organism is cataloged under the accession number CZCT00000000.2, which provides a reference for genomic studies and further research into its biology. Cyanobacteria like Planktothrix sp. PCC 11201 are known for their role in aquatic ecosystems, particularly in terms of primary production and nitrogen fixation. Their ability to perform photosynthesis allows them to contribute significantly to the biomass of freshwater environments. Additionally, they can influence the nutrient dynamics within these ecosystems, often impacting the overall health and stability of aquatic habitats. The presence of a single replicon in Planktothrix sp. PCC 11201 may suggest adaptations that enhance its survival and competitiveness in fluctuating environmental conditions. This trait could also facilitate quicker responses to changes in nutrient availability or light conditions, which are critical for maintaining dominance in its ecological niche. Overall, the genomic simplicity of Planktothrix sp. PCC 11201, as indicated by its single replicon, along with its ecological roles, underscores its importance in freshwater ecosystems. Understanding its genetic makeup and functional capabilities can provide insights into the ecological dynamics of cyanobacterial populations and their interactions within aquatic environments.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderOscillatoriales
FamilyMicrocoleaceae
GenusPlanktothrix
SpeciesPlanktothrix sp. PCC 11201
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatbenthic
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Planktothrix sp. PCC 11201 isolate BBR_PRJEB10991 genome assembly,

Gene Summary

Adenine Count

1787115 bp

Thymine Count

1783485 bp

Guanine Count

1196263 bp

Cytosine Count

1198112 bp

Genome Length

5965039 bp

Protein-coding Genes

5144 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Ribosomal rna 23s ribosomal rnaNot AvailableNot AvailablePositive3 - 2887Not Available
Ribosomal rna 5s ribosomal rnaNot AvailableNot AvailablePositive12 - 127Not Available
Ribosomal rna 16s ribosomal rnaNot AvailableNot AvailablePositive20 - 1498Not Available
Ribosomal rna 5s ribosomal rnaNot AvailableNot AvailablePositive386 - 510Not Available
chloroplast stem-loop binding protein of 41 kda b, chloroplasticPL11201_10001Not AvailableNegative146 - 108135177.9
Ribosomal rna 5s ribosomal rnaNot AvailableNot AvailablePositive1260 - 1375Not Available
exported hypothetical proteinPL11201_10002Not AvailableNegative1177 - 165316614.8
ribose-phosphate pyrophosphokinasePL11201_10003Not AvailableNegative1803 - 279536198.0
serine/threonine kinasePL11201_10004Not AvailablePositive2981 - 496371769.6
atp-dependent dethiobiotin synthetase biodPL11201_10005Not AvailablePositive5045 - 572824917.3

Displaying genes 1 – 10 of 5205 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.