Planktothrix sp. PCC 11201

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Oscillatoriales

Family

Microcoleaceae

Genus

Planktothrix

Description

Planktothrix sp. PCC 11201 is a cyanobacterium characterized by a single replicon, indicating its genomic structure is streamlined and efficient. The organism is cataloged under the accession number CZCT00000000.2, which provides a reference for genomic studies and further research into its biology. Cyanobacteria like Planktothrix sp. PCC 11201 are known for their role in aquatic ecosystems, particularly in terms of primary production and nitrogen fixation. Their ability to perform photosynthesis allows them to contribute significantly to the biomass of freshwater environments. Additionally, they can influence the nutrient dynamics within these ecosystems, often impacting the overall health and stability of aquatic habitats. The presence of a single replicon in Planktothrix sp. PCC 11201 may suggest adaptations that enhance its survival and competitiveness in fluctuating environmental conditions. This trait could also facilitate quicker responses to changes in nutrient availability or light conditions, which are critical for maintaining dominance in its ecological niche. Overall, the genomic simplicity of Planktothrix sp. PCC 11201, as indicated by its single replicon, along with its ecological roles, underscores its importance in freshwater ecosystems. Understanding its genetic makeup and functional capabilities can provide insights into the ecological dynamics of cyanobacterial populations and their interactions within aquatic environments.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderOscillatoriales
FamilyMicrocoleaceae
GenusPlanktothrix
SpeciesPlanktothrix sp. PCC 11201
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatbenthic
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Planktothrix sp. PCC 11201 isolate BBR_PRJEB10991 genome assembly,

Gene Summary

Adenine Count

1787115 bp

Thymine Count

1783485 bp

Guanine Count

1196263 bp

Cytosine Count

1198112 bp

Genome Length

5965039 bp

Protein-coding Genes

5144 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conserved membrane hypothetical proteinPL11201_610056Not AvailableNegative3505868 - 35061349640.3
xre family transcriptional regulator (fragment)PL11201_620001Not AvailableNegative3506386 - 35065717305.77
putative ribosome biogenesis gtpase rsga 1PL11201_620002Not AvailableNegative3506902 - 350804442989.6
sira family proteinPL11201_620003Not AvailableNegative3508034 - 35083039965.82
chaperone protein dnaj, heat shock protein (hsp40), co-chaperone with dnakPL11201_620004Not AvailableNegative3508482 - 350961240841.4
chaperone protein dnak (heat shock protein 70) (heat shock 70 kda protein) (hsp70)PL11201_620005Not AvailableNegative3509631 - 351170074519.5
protein grpePL11201_620006Not AvailableNegative3512061 - 351280426962.1
general secretion pathway protein ePL11201_620007Not AvailablePositive3513262 - 351526574836.0
twitching mobility proteinPL11201_620008Not AvailablePositive3515430 - 351653040087.7
type ii secretion system proteinPL11201_620009Not AvailablePositive3516795 - 351792841294.4

Displaying genes 3171 – 3180 of 5205 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.