Rhizobium sp. N113

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. N113 is a rod-shaped bacterium notable for its flagella, which facilitate motility. This species is characterized by a complex genome comprising five replicons, a feature that may contribute to its adaptability and genetic diversity. The presence of multiple replicons can enhance the organism's ability to exchange genetic material, which is crucial for its survival in varied environmental conditions. The accessions associated with Rhizobium sp. N113 are NZ_CP013517.1, NZ_CP013521.1, NZ_CP013518.1, NZ_CP013519.1, and NZ_CP013520.1. These identifiers correspond to genomic sequences that provide insights into its genetic makeup and potential functional capabilities. From a biological and ecological perspective, Rhizobium species are well-known for their symbiotic relationships with leguminous plants, where they play a critical role in nitrogen fixation. This process converts atmospheric nitrogen into a form that plants can utilize, thereby enhancing soil fertility and supporting plant growth. The ability of Rhizobium sp. N113 to establish such symbiosis may have significant implications for agricultural practices and ecosystem health, particularly in nitrogen-poor soils. Understanding the specific traits and genomic characteristics of Rhizobium sp. N113 can aid in harnessing its capabilities for sustainable agricultural development.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. N113
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp. N113
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

60276 bp

Thymine Count

60472 bp

Guanine Count

97988 bp

Cytosine Count

96415 bp

Genome Length

315151 bp

Protein-coding Genes

308 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii toxin-antitoxin system rele/pare family toxinAMJ96_RS21480Not AvailableNegative86 - 40912516.0
type ii toxin-antitoxin system phd/yefm family antitoxinAMJ96_RS21485Not AvailableNegative409 - 69010457.6
hypothetical proteinAMJ96_RS33015Not AvailableNegative695 - 8385321.63
llm class flavin-dependent oxidoreductaseAMJ96_RS21490Not AvailablePositive909 - 190135623.3
llm class flavin-dependent oxidoreductaseAMJ96_RS21495Not AvailablePositive1925 - 327449114.9
m20 aminoacylase family proteinAMJ96_RS21500Not AvailablePositive3293 - 449242790.6
gnat family n-acetyltransferaseAMJ96_RS21505Not AvailablePositive4489 - 505221109.9
amino acid abc transporter permease/atp-binding proteinAMJ96_RS33955Not AvailablePositive5089 - 686465253.0
abc transporter substrate-binding proteinAMJ96_RS21520Not AvailablePositive6956 - 790033661.9
abc transporter substrate-binding proteinAMJ96_RS21525Not AvailablePositive7972 - 891033375.6

Displaying genes 1 – 10 of 6308 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.