Rhizobium sp. N113

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. N113 is a rod-shaped bacterium notable for its flagella, which facilitate motility. This species is characterized by a complex genome comprising five replicons, a feature that may contribute to its adaptability and genetic diversity. The presence of multiple replicons can enhance the organism's ability to exchange genetic material, which is crucial for its survival in varied environmental conditions. The accessions associated with Rhizobium sp. N113 are NZ_CP013517.1, NZ_CP013521.1, NZ_CP013518.1, NZ_CP013519.1, and NZ_CP013520.1. These identifiers correspond to genomic sequences that provide insights into its genetic makeup and potential functional capabilities. From a biological and ecological perspective, Rhizobium species are well-known for their symbiotic relationships with leguminous plants, where they play a critical role in nitrogen fixation. This process converts atmospheric nitrogen into a form that plants can utilize, thereby enhancing soil fertility and supporting plant growth. The ability of Rhizobium sp. N113 to establish such symbiosis may have significant implications for agricultural practices and ecosystem health, particularly in nitrogen-poor soils. Understanding the specific traits and genomic characteristics of Rhizobium sp. N113 can aid in harnessing its capabilities for sustainable agricultural development.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. N113
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp. N113
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp. N113 plasmid pRspN113a, complete sequence.

Gene Summary

Adenine Count

60276 bp

Thymine Count

60472 bp

Guanine Count

97988 bp

Cytosine Count

96415 bp

Genome Length

315151 bp

Protein-coding Genes

308 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
saccharopine dehydrogenase family proteinAMJ96_RS01850Not AvailablePositive375843 - 37692539121.5
radical sam family heme chaperone hemwAMJ96_RS01855Not AvailableNegative376987 - 37818944728.1
rdgb/ham1 family non-canonical purine ntp pyrophosphataseAMJ96_RS01860Not AvailableNegative378199 - 37884322970.9
voc family proteinAMJ96_RS01865Not AvailableNegative378844 - 37926915382.3
ribonuclease phAMJ96_RS01870Not AvailableNegative379266 - 37998526031.2
heat-inducible transcriptional repressor hrcaAMJ96_RS01875Not AvailablePositive380112 - 38120039552.5
nucleotide exchange factor grpeAMJ96_RS01880Not AvailablePositive381312 - 38194722864.9
nucleoside hydrolaseAMJ96_RS01885Not AvailableNegative381986 - 38293034451.9
hsp20 family proteinAMJ96_RS01890Not AvailablePositive383212 - 38363715640.9
duf1150 family proteinAMJ96_RS01895Not AvailablePositive383685 - 3839429435.23

Displaying genes 691 – 700 of 6308 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.