Rhizobium sp. N113

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. N113 is a rod-shaped bacterium notable for its flagella, which facilitate motility. This species is characterized by a complex genome comprising five replicons, a feature that may contribute to its adaptability and genetic diversity. The presence of multiple replicons can enhance the organism's ability to exchange genetic material, which is crucial for its survival in varied environmental conditions. The accessions associated with Rhizobium sp. N113 are NZ_CP013517.1, NZ_CP013521.1, NZ_CP013518.1, NZ_CP013519.1, and NZ_CP013520.1. These identifiers correspond to genomic sequences that provide insights into its genetic makeup and potential functional capabilities. From a biological and ecological perspective, Rhizobium species are well-known for their symbiotic relationships with leguminous plants, where they play a critical role in nitrogen fixation. This process converts atmospheric nitrogen into a form that plants can utilize, thereby enhancing soil fertility and supporting plant growth. The ability of Rhizobium sp. N113 to establish such symbiosis may have significant implications for agricultural practices and ecosystem health, particularly in nitrogen-poor soils. Understanding the specific traits and genomic characteristics of Rhizobium sp. N113 can aid in harnessing its capabilities for sustainable agricultural development.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. N113
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp. N113
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp. N113 plasmid pRspN113a, complete sequence.

Gene Summary

Adenine Count

60276 bp

Thymine Count

60472 bp

Guanine Count

97988 bp

Cytosine Count

96415 bp

Genome Length

315151 bp

Protein-coding Genes

308 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
twin-arginine translocase tata/tate family subunitAMJ96_RS09160Not AvailablePositive1880115 - 18803066984.67
sec-independent protein translocase protein tatbAMJ96_RS09165Not AvailablePositive1880358 - 188097221809.5
twin-arginine translocase subunit tatcAMJ96_RS09170Not AvailablePositive1880969 - 188179630993.7
serine--trna ligaseAMJ96_RS09175Not AvailablePositive1881893 - 188317647589.8
5'/3'-nucleotidase sureAMJ96_RS09180Not AvailablePositive1883181 - 188395428019.5
protein-l-isoaspartate(d-aspartate) o-methyltransferaseAMJ96_RS09185Not AvailablePositive1883951 - 188460423910.1
lysr family transcriptional regulatorAMJ96_RS09190Not AvailableNegative1884682 - 188559032538.6
doxx family proteinAMJ96_RS09195Not AvailablePositive1885830 - 188620112849.3
llm class flavin-dependent oxidoreductaseAMJ96_RS09200Not AvailablePositive1886421 - 188745537113.7
m23 family metallopeptidaseAMJ96_RS09205Not AvailablePositive1887651 - 188924054196.9

Displaying genes 2171 – 2180 of 6308 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.