Rhizobium sp. N113

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. N113 is a rod-shaped bacterium notable for its flagella, which facilitate motility. This species is characterized by a complex genome comprising five replicons, a feature that may contribute to its adaptability and genetic diversity. The presence of multiple replicons can enhance the organism's ability to exchange genetic material, which is crucial for its survival in varied environmental conditions. The accessions associated with Rhizobium sp. N113 are NZ_CP013517.1, NZ_CP013521.1, NZ_CP013518.1, NZ_CP013519.1, and NZ_CP013520.1. These identifiers correspond to genomic sequences that provide insights into its genetic makeup and potential functional capabilities. From a biological and ecological perspective, Rhizobium species are well-known for their symbiotic relationships with leguminous plants, where they play a critical role in nitrogen fixation. This process converts atmospheric nitrogen into a form that plants can utilize, thereby enhancing soil fertility and supporting plant growth. The ability of Rhizobium sp. N113 to establish such symbiosis may have significant implications for agricultural practices and ecosystem health, particularly in nitrogen-poor soils. Understanding the specific traits and genomic characteristics of Rhizobium sp. N113 can aid in harnessing its capabilities for sustainable agricultural development.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. N113
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp. N113
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp. N113 plasmid pRspN113a, complete sequence.

Gene Summary

Adenine Count

60276 bp

Thymine Count

60472 bp

Guanine Count

97988 bp

Cytosine Count

96415 bp

Genome Length

315151 bp

Protein-coding Genes

308 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-deoxy-glucuronate isomeraseAMJ96_RS06805Not AvailableNegative1388179 - 138897628965.8
myo-inosose-2 dehydrataseAMJ96_RS06810Not AvailableNegative1389132 - 139004933506.8
3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)AMJ96_RS06815Not AvailableNegative1390117 - 139196765621.8
bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2- deoxyphosphogluconate aldolaseAMJ96_RS06820Not AvailableNegative1392172 - 139410670686.7
murr/rpir family transcriptional regulatorAMJ96_RS06825Not AvailableNegative1394198 - 139507331850.6
gfo/idh/moca family proteinAMJ96_RS06830Not AvailablePositive1395283 - 139639840851.1
nad(p)/fad-dependent oxidoreductaseAMJ96_RS06835Not AvailablePositive1396486 - 139770343873.4
Trna-serNot AvailableNot AvailablePositive1397896 - 1397986Not Available
porinAMJ96_RS06845Not AvailablePositive1398654 - 139967936607.8
gdp-mannose 4,6-dehydrataseAMJ96_RS06850Not AvailableNegative1399833 - 140092441103.8

Displaying genes 1691 – 1700 of 6308 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.