Rhizobium sp. N113

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. N113 is a rod-shaped bacterium notable for its flagella, which facilitate motility. This species is characterized by a complex genome comprising five replicons, a feature that may contribute to its adaptability and genetic diversity. The presence of multiple replicons can enhance the organism's ability to exchange genetic material, which is crucial for its survival in varied environmental conditions. The accessions associated with Rhizobium sp. N113 are NZ_CP013517.1, NZ_CP013521.1, NZ_CP013518.1, NZ_CP013519.1, and NZ_CP013520.1. These identifiers correspond to genomic sequences that provide insights into its genetic makeup and potential functional capabilities. From a biological and ecological perspective, Rhizobium species are well-known for their symbiotic relationships with leguminous plants, where they play a critical role in nitrogen fixation. This process converts atmospheric nitrogen into a form that plants can utilize, thereby enhancing soil fertility and supporting plant growth. The ability of Rhizobium sp. N113 to establish such symbiosis may have significant implications for agricultural practices and ecosystem health, particularly in nitrogen-poor soils. Understanding the specific traits and genomic characteristics of Rhizobium sp. N113 can aid in harnessing its capabilities for sustainable agricultural development.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. N113
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp. N113
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp. N113 plasmid pRspN113a, complete sequence.

Gene Summary

Adenine Count

60276 bp

Thymine Count

60472 bp

Guanine Count

97988 bp

Cytosine Count

96415 bp

Genome Length

315151 bp

Protein-coding Genes

308 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cbs domain-containing proteinAMJ96_RS22055Not AvailableNegative126544 - 12722124765.2
heme lyase ccmf/nrfe family subunitAMJ96_RS22060Not AvailableNegative127354 - 12934871489.6
cytochrome c maturation protein ccmeAMJ96_RS22065Not AvailableNegative129345 - 12984217261.8
c-type cytochrome biogenesis protein ccmiAMJ96_RS22070Not AvailableNegative129839 - 13071131761.4
crp/fnr family transcriptional regulatorAMJ96_RS22075Not AvailableNegative130809 - 13147423882.9
cbb3-type cytochrome oxidase assembly protein ccosAMJ96_RS22080Not AvailableNegative131507 - 1316655857.2
cation-translocating p-type atpaseAMJ96_RS22085Not AvailableNegative131662 - 13394479961.8
fixh family proteinAMJ96_RS22090Not AvailableNegative133941 - 13442317300.4
cytochrome c oxidase accessory protein ccogAMJ96_RS22095Not AvailableNegative134420 - 13598858511.8
hypothetical proteinAMJ96_RS22100Not AvailableNegative136159 - 1363446609.84

Displaying genes 121 – 130 of 6308 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.