Psychrobacter sp. P11G3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter sp. P11G3 is a psychrophilic bacterium known for its capability to thrive in cold environments. One of its notable characteristics is the presence of flagella, which may contribute to its motility in aquatic habitats. This trait is significant for the organism's survival and adaptation to its ecological niche. The genomic structure of Psychrobacter sp. P11G3 consists of six replicons, indicating a complex genetic organization that may enhance its adaptability and resilience in varying environments. The presence of multiple replicons can be advantageous for gene regulation and the maintenance of genomic stability under diverse conditions, particularly in cold habitats where metabolic processes may be slower. The bacterium has been cataloged under several accessions, including NZ_CM003598.1, NZ_CM003599.1, LJCF00000000.1, NZ_CM003596.1, NZ_CM003597.1, and NZ_CM003600.1. These accessions provide a basis for further genomic studies and comparisons with other strains within the Psychrobacter genus. In summary, the combination of flagella presence and a multi-replicon genome in Psychrobacter sp. P11G3 suggests a specialization for life in cold environments, potentially influencing its ecological role in nutrient cycling and interactions within microbial communities in such habitats. This adaptability underscores the importance of psychrophilic microorganisms in understanding biodiversity and ecosystem dynamics in cold regions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter sp. P11G3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter sp. P11G3 plasmid pPspP11G3a, whole genome shotgun

Gene Summary

Adenine Count

2819 bp

Thymine Count

2527 bp

Guanine Count

1586 bp

Cytosine Count

1603 bp

Genome Length

8535 bp

Protein-coding Genes

7 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysophospholipid acyltransferase family proteinAK824_RS12815Not AvailableNegative3160693 - 316138825425.3
dna topoisomerase iv subunit bAK824_RS12820Q9HUJ8Negative3161554 - 316344068973.9
yqia/ycfp family alpha/beta fold hydrolaseAK824_RS12825P0A8Z9Negative3163551 - 316421024152.6
duf1289 domain-containing proteinAK824_RS12830Q8CW10Positive3164398 - 316465810298.4
hypothetical proteinAK824_RS12835Not AvailableNegative3164736 - 316570136310.5
dgqhr domain-containing proteinAK824_RS12840Not AvailableNegative3165702 - 316667937300.3
5s ribosomal rnaNot AvailableNot AvailablePositive3166903 - 3167016Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive3167201 - 3170056Not Available
Trna-alaNot AvailableNot AvailablePositive3170404 - 3170479Not Available
Trna-ileNot AvailableNot AvailablePositive3170489 - 3170565Not Available

Displaying genes 2601 – 2610 of 5299 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

17 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001789(3R)-citramalateC5H6O5Chemical structure of (3R)-citramalateNot available
Average146.099Da
Monoisotopic146.0226205Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001988(R)-mevalonateC6H11O4Chemical structure of (R)-mevalonateNot available
Average147.1491Da
Monoisotopic147.0657338Da
BASm0002131(3S)-hydroxy-3-methylglutaryl-CoAC27H39N7O20P3SChemical structure of (3S)-hydroxy-3-methylglutaryl-CoANot available
Average906.62Da
Monoisotopic906.1183419Da
BASm0002833FMNH2C17H21N4O9PChemical structure of FMNH25666-16-0
Average456.3438Da
Monoisotopic456.1046148Da
BASm0002909O-acetyl-L-homoserineC6H11NO4Chemical structure of O-acetyl-L-homoserine7540-67-2
Average161.1558Da
Monoisotopic161.0688078Da
BASm0003334aldehydo-D-ribose 5-phosphateC5H11O8PChemical structure of aldehydo-D-ribose 5-phosphateNot available
Average230.1098Da
Monoisotopic230.0191538Da

Displaying 1–10 of 17 metabolites

Health Effects

No health effects information available for this bacterium.