Psychrobacter sp. P11G3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter sp. P11G3 is a psychrophilic bacterium known for its capability to thrive in cold environments. One of its notable characteristics is the presence of flagella, which may contribute to its motility in aquatic habitats. This trait is significant for the organism's survival and adaptation to its ecological niche. The genomic structure of Psychrobacter sp. P11G3 consists of six replicons, indicating a complex genetic organization that may enhance its adaptability and resilience in varying environments. The presence of multiple replicons can be advantageous for gene regulation and the maintenance of genomic stability under diverse conditions, particularly in cold habitats where metabolic processes may be slower. The bacterium has been cataloged under several accessions, including NZ_CM003598.1, NZ_CM003599.1, LJCF00000000.1, NZ_CM003596.1, NZ_CM003597.1, and NZ_CM003600.1. These accessions provide a basis for further genomic studies and comparisons with other strains within the Psychrobacter genus. In summary, the combination of flagella presence and a multi-replicon genome in Psychrobacter sp. P11G3 suggests a specialization for life in cold environments, potentially influencing its ecological role in nutrient cycling and interactions within microbial communities in such habitats. This adaptability underscores the importance of psychrophilic microorganisms in understanding biodiversity and ecosystem dynamics in cold regions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter sp. P11G3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter sp. P11G3 plasmid pPspP11G3c, whole genome shotgun

Gene Summary

Adenine Count

1662 bp

Thymine Count

1841 bp

Guanine Count

1086 bp

Cytosine Count

1032 bp

Genome Length

5621 bp

Protein-coding Genes

7 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
replication initiation protein repmAK824_RS13215P17492Positive235 - 121237519.9
hypothetical proteinAK824_RS13220Not AvailablePositive1529 - 243434781.5
nucleotidyl transferase abieii/abigii toxin family proteinAK824_RS13225Not AvailablePositive2437 - 332434297.1
atp-binding proteinAK824_RS13230Not AvailableNegative3394 - 528972628.6
hypothetical proteinAK824_RS13235Not AvailableNegative5399 - 571011822.3
moba/mobl family proteinAK824_RS13240Not AvailablePositive5966 - 768164014.9
hypothetical proteinAK824_RS13245Not AvailablePositive7684 - 848729532.8
replication initiation protein repmAK824_RS13250P17492Positive259 - 121536985.2
hypothetical proteinAK824_RS13255Not AvailablePositive1321 - 216931702.4
abiv family abortive infection proteinAK824_RS13260Not AvailableNegative2255 - 288723575.1

Displaying genes 1 – 10 of 5299 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

20 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00021577-cyano-7-deazaguanineC7H5N5OChemical structure of 7-cyano-7-deazaguanineNot available
Average175.1475Da
Monoisotopic175.0494098Da
BASm00030222-methyl-cis-aconitateC7H5O6Chemical structure of 2-methyl-cis-aconitateNot available
Average185.113Da
Monoisotopic185.0102586Da
BASm00030862-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-alpha-D-glucosaminyl 1-phosphateC34H64NO12PChemical structure of 2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-alpha-D-glucosaminyl 1-phosphateNot available
Average709.8452Da
Monoisotopic709.416613029Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003419trimethylamineC3H9NChemical structure of trimethylamine75-50-3
Average59.1103Da
Monoisotopic59.07349929Da
BASm0003462(2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinateC13H19N4O12PChemical structure of (2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate3031-95-6
Average454.2833Da
Monoisotopic454.0737086Da

Displaying 1–10 of 20 metabolites

Health Effects

No health effects information available for this bacterium.