candidate division MSBL1 archaeon SCGC-AAA833F18

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Order

Family

Genus

Description

The candidate division MSBL1 includes the archaeon SCGC-AAA833F18, characterized by a single replicon, indicating a streamlined genomic structure. This trait may suggest efficiency in replication and cellular processes, which is common among certain microbial groups that thrive in specific ecological niches. The genomic data for SCGC-AAA833F18 is housed under the accession number LHYO00000000.1. This accession provides a reference point for researchers interested in the genetic makeup of this candidate division, facilitating further studies into its potential metabolic pathways, environmental adaptations, and phylogenetic relationships. While the specific ecological role of SCGC-AAA833F18 remains to be fully elucidated, the streamlined nature of its genome and the association with the candidate division MSBL1 suggests it may inhabit extreme or specialized environments, a common trait among many archaeal organisms. The adaptation to such niches often involves unique metabolic capabilities, which could contribute to biogeochemical processes in its habitat. In summary, the archaeon SCGC-AAA833F18, with its single replicon and associated genomic data under accession LHYO00000000.1, provides intriguing insights into the diversity of the MSBL1 candidate division. Understanding its ecological role could enhance our knowledge of archaeal biology and the ecological dynamics of microbial communities in extreme environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

candidate division MSBL1 archaeon SCGC-AAA833F18


Gene Summary

Adenine Count

74589 bp

Thymine Count

73772 bp

Guanine Count

60320 bp

Cytosine Count

61234 bp

Genome Length

269915 bp

Protein-coding Genes

278 genes

Non-Coding Genes

2 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAKJ35_00005Not AvailableNegative147 - 3417399.02
hypothetical proteinAKJ35_00010Not AvailableNegative428 - 84415830.2
hypothetical proteinAKJ35_00020Not AvailablePositive3373 - 465948930.9
hypothetical proteinAKJ35_00025Not AvailablePositive4656 - 704692566.3
hypothetical proteinAKJ35_00035Not AvailableNegative7775 - 846424608.3
dna repair and recombination protein radaAKJ35_00040Not AvailableNegative8481 - 942834277.5
hypothetical proteinAKJ35_00045Not AvailableNegative9445 - 1152076951.7
3-hydroxy-3-methylglutaryl-coa reductaseAKJ35_00050Not AvailableNegative11589 - 1285745408.7
glutamate synthaseAKJ35_00055Not AvailablePositive13043 - 1461157683.1
hypothetical proteinAKJ35_00060Not AvailablePositive14728 - 149166997.41

Displaying genes 1 – 10 of 280 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

24 records
Metabolite IDMetabolite nameStructureCAS number
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00015513D-3,5/4-trihydroxycyclohexane-1,2-dioneC6H8O5Chemical structure of 3D-3,5/4-trihydroxycyclohexane-1,2-dioneNot available
Average160.125Da
Monoisotopic160.0371734Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm00019783-(4-hydroxyphenyl)pyruvateC9H7O4Chemical structure of 3-(4-hydroxyphenyl)pyruvateNot available
Average179.1495Da
Monoisotopic179.034433712Da
BASm0002282(2R)-2,3-dihydroxy-3-methylbutanoateC5H9O4Chemical structure of (2R)-2,3-dihydroxy-3-methylbutanoateNot available
Average133.1226Da
Monoisotopic133.0500838Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da

Displaying 1–10 of 24 metabolites

Health Effects

No health effects information available for this bacterium.