Citrobacter sp. MGH109

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter sp. MGH109 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species possesses true flagella, which facilitate motility. The bacterium is noted for having a single replicon, indicating a streamlined genetic organization. The accession number for Citrobacter sp. MGH109 is LESR00000000.1, which serves as a reference for genomic information in databases. The single replicon structure may suggest a simpler genetic regulation compared to organisms with multiple replicons, potentially impacting its adaptability in various environments. Citrobacter species are typically found in the environment, including soil and water, and are known for their ability to thrive in diverse ecological niches. This adaptability may allow Citrobacter sp. MGH109 to play a role in biogeochemical cycles or interactions within microbial communities. Understanding the specific traits of Citrobacter sp. MGH109 could offer insights into its ecological roles, particularly in nutrient cycling or as a contributor to the microbial diversity in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter sp. MGH109
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter sp. MGH109
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter sp. MGH109 aetgK-supercont1.11.C45, whole genome

Gene Summary

Adenine Count

1348447 bp

Thymine Count

1351174 bp

Guanine Count

1424533 bp

Cytosine Count

1424583 bp

Genome Length

5548738 bp

Protein-coding Genes

5275 genes

Non-Coding Genes

224 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
inner membrane transporter yjemSK37_03534P0A2N5Negative3666907 - 366840954686.0
elongation factor p-(r)-beta-lysine ligaseSK37_03535A8AMP1Negative3668624 - 366960136995.1
fumarate reductase flavoprotein subunitSK37_03536P00363Positive3669926 - 367171665412.8
fumarate reductase iron-sulfur subunitSK37_03537P0AC49Positive3671709 - 367244327158.5
fumarate reductase subunit cSK37_03538A8AMP4Positive3672454 - 367284914880.8
fumarate reductase subunit dSK37_03539A8AMP5Positive3672860 - 367321613060.7
hth-type transcriptional activator amprSK37_03540P12529Negative3673259 - 367413432495.2
beta-lactamaseSK37_03541P05193Positive3674266 - 367541142061.6
outer membrane lipoprotein blcSK37_03542Q46036Positive3675504 - 367603719951.9
quaternary ammonium compound-resistance protein sugeSK37_03543O69279Negative3676034 - 367635110898.0

Displaying genes 3551 – 3560 of 5499 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

317 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 317 metabolites

Health Effects

No health effects information available for this bacterium.