Citrobacter sp. MGH109

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter sp. MGH109 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species possesses true flagella, which facilitate motility. The bacterium is noted for having a single replicon, indicating a streamlined genetic organization. The accession number for Citrobacter sp. MGH109 is LESR00000000.1, which serves as a reference for genomic information in databases. The single replicon structure may suggest a simpler genetic regulation compared to organisms with multiple replicons, potentially impacting its adaptability in various environments. Citrobacter species are typically found in the environment, including soil and water, and are known for their ability to thrive in diverse ecological niches. This adaptability may allow Citrobacter sp. MGH109 to play a role in biogeochemical cycles or interactions within microbial communities. Understanding the specific traits of Citrobacter sp. MGH109 could offer insights into its ecological roles, particularly in nutrient cycling or as a contributor to the microbial diversity in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter sp. MGH109
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter sp. MGH109
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter sp. MGH109 aetgK-supercont1.11.C45, whole genome

Gene Summary

Adenine Count

1348447 bp

Thymine Count

1351174 bp

Guanine Count

1424533 bp

Cytosine Count

1424583 bp

Genome Length

5548738 bp

Protein-coding Genes

5275 genes

Non-Coding Genes

224 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aspartate kinase, monofunctional classSK37_01336Not AvailableNegative1396705 - 139806649225.8
hypothetical proteinSK37_01337P56744Positive1398678 - 140006049518.1
hypothetical proteinSK37_01338Q43908Positive1400076 - 140153953209.7
c4-dicarboxylic acid transporter dauaSK37_01339P0AFR3Negative1401660 - 140331558449.5
ribose-phosphate pyrophosphokinaseSK37_01340P0A1V7Negative1403467 - 140441434218.3
4-diphosphocytidyl-2-c-methyl-d-erythritol kinaseSK37_01341A7ZZE4Negative1404681 - 140553230832.2
outer-membrane lipoprotein lolbSK37_01342A8AG00Negative1405529 - 140615223529.0
glutamyl-trna reductaseSK37_01343B5F4H5Positive1406364 - 140762046180.2
peptide chain release factor 1SK37_01344A8AG02Positive1407662 - 140874440490.6
release factor glutamine methyltransferaseSK37_01345P0ACC1Positive1408744 - 140957730604.5

Displaying genes 1451 – 1460 of 5499 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

317 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 317 metabolites

Health Effects

No health effects information available for this bacterium.