Flavobacterium aquicola str. DSM 100880

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium aquicola str. DSM 100880 is a Gram-negative, rod-shaped bacterium that exhibits motility due to the presence of true flagella. This organism is classified as a facultative aerobe/anaerobe, indicating its ability to thrive in both the presence and absence of oxygen. It is mesophilic, with an optimal growth temperature of 25°C, which aligns with the environmental conditions typically found in aquatic habitats. Flavobacterium aquicola is non-spore-forming and possesses a single replicon, which is relevant for its genetic and reproductive characteristics. The organism's mobility and adaptability to varying oxygen conditions suggest it plays a versatile role in its ecological niche, potentially participating in the degradation of organic matter in freshwater systems. The presence of Flavobacterium aquicola in aquatic environments might contribute to nutrient cycling and the maintenance of ecological balance, as its metabolic capabilities allow it to utilize various substrates under different environmental conditions. Its growth at an optimal temperature of 25°C suggests that it may be well-suited for temperate aquatic ecosystems, where it can interact with other microbial communities and contribute to the overall functioning of these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium aquicola
StrainDSM 100880

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium aquicola str. DSM 100880
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium aquicola strain DSM 100880 Ga0196849_147, whole

Gene Summary

Adenine Count

1699166 bp

Thymine Count

1672264 bp

Guanine Count

870232 bp

Cytosine Count

882066 bp

Genome Length

5124726 bp

Protein-coding Genes

4334 genes

Non-Coding Genes

227 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-acetylgalactosamine-n, n'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-n-acetylgalactosaminyltransferaseC8P67_10661Not AvailableNegative2737081 - 273819943023.6
gt2 family glycosyltransferaseC8P67_10662Not AvailablePositive2738246 - 273916035470.7
pst family polysaccharide transporterC8P67_10663Not AvailableNegative2739364 - 274063848116.8
dtdp-4-amino-4,6-dideoxygalactose transaminaseC8P67_10664Not AvailableNegative2740640 - 274174041338.9
acetyltransferase (gnat) family proteinC8P67_10665Not AvailableNegative2741737 - 274271437998.3
putative membrane protein yeihC8P67_10666Not AvailableNegative2742839 - 274344122226.2
trmh family rna methyltransferaseC8P67_10667Not AvailablePositive2743589 - 274437428589.4
dna-binding marr family transcriptional regulatorC8P67_10668Not AvailablePositive2744523 - 274495116520.0
peptidase s41-like proteinC8P67_10669Not AvailablePositive2744964 - 274630150129.9
cubico group peptidase (beta-lactamase class c family)C8P67_10670Not AvailablePositive2746395 - 274794257822.5

Displaying genes 2511 – 2520 of 4561 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.