Flavobacterium aquicola str. DSM 100880

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium aquicola str. DSM 100880 is a Gram-negative, rod-shaped bacterium that exhibits motility due to the presence of true flagella. This organism is classified as a facultative aerobe/anaerobe, indicating its ability to thrive in both the presence and absence of oxygen. It is mesophilic, with an optimal growth temperature of 25°C, which aligns with the environmental conditions typically found in aquatic habitats. Flavobacterium aquicola is non-spore-forming and possesses a single replicon, which is relevant for its genetic and reproductive characteristics. The organism's mobility and adaptability to varying oxygen conditions suggest it plays a versatile role in its ecological niche, potentially participating in the degradation of organic matter in freshwater systems. The presence of Flavobacterium aquicola in aquatic environments might contribute to nutrient cycling and the maintenance of ecological balance, as its metabolic capabilities allow it to utilize various substrates under different environmental conditions. Its growth at an optimal temperature of 25°C suggests that it may be well-suited for temperate aquatic ecosystems, where it can interact with other microbial communities and contribute to the overall functioning of these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium aquicola
StrainDSM 100880

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium aquicola str. DSM 100880
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium aquicola strain DSM 100880 Ga0196849_147, whole

Gene Summary

Adenine Count

1699166 bp

Thymine Count

1672264 bp

Guanine Count

870232 bp

Cytosine Count

882066 bp

Genome Length

5124726 bp

Protein-coding Genes

4334 genes

Non-Coding Genes

227 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lyttr family two component transcriptional regulatorC8P67_102269Not AvailableNegative937610 - 93831427184.2
histidine kinaseC8P67_102270Not AvailableNegative938314 - 93935440772.2
outer membrane protein tolcC8P67_102271Not AvailablePositive939511 - 94089651968.8
multidrug efflux pump subunit acrbC8P67_102272Not AvailablePositive940908 - 944192119686.0
rnd family efflux transporter mfp subunitC8P67_102273Not AvailablePositive944182 - 94526439794.2
putative dna-binding proteinC8P67_102274Not AvailablePositive945450 - 94636434572.0
rep element-mobilizing transposase raytC8P67_102275Not AvailablePositive946417 - 94696521585.6
hypothetical proteinC8P67_102276Not AvailablePositive947060 - 94764721712.9
putative zinc-type alcohol dehydrogenase-like proteinC8P67_102278Not AvailablePositive948184 - 94923937733.6
cbb3-type cytochrome c oxidase subunit iiiC8P67_102279Not AvailableNegative949362 - 94976314683.5

Displaying genes 991 – 1000 of 4561 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.