Rathayibacter tanaceti

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Rathayibacter

Description

Rathayibacter tanaceti is a gram-positive bacterium characterized by its rod shape. It is notable for having a single replicon, which is indicative of its genomic organization. The strain is cataloged under the accession number LIIN00000000.1, providing a reference for researchers interested in studying its genetic and phenotypic properties. As a member of the Rathayibacter genus, R. tanaceti is likely involved in interactions with host plants, specifically those within the Asteraceae family, as indicated by the genus's known associations with plant pathogens. The ecological role of R. tanaceti may involve influencing plant health and development, which is an important aspect of understanding microbial interactions within agricultural ecosystems. Given its gram-positive nature, R. tanaceti may possess features such as a thick peptidoglycan layer, which could contribute to its resilience in various environments. This trait is common among bacteria that interact closely with plants, as it may protect them from environmental stresses. Overall, Rathayibacter tanaceti represents a specific lineage within microbial ecology that warrants further investigation, particularly regarding its potential impact on plant systems and agricultural practices. Understanding its biology could provide insights into managing plant health and addressing challenges related to crop production.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusRathayibacter
SpeciesRathayibacter tanaceti
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rathayibacter tanaceti strain VKM Ac-2596 ACH61_contig000331,

Gene Summary

Adenine Count

465881 bp

Thymine Count

461263 bp

Guanine Count

1127750 bp

Cytosine Count

1113990 bp

Genome Length

3168884 bp

Protein-coding Genes

3209 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinACH61_03207Not AvailableNegative3094194 - 309476618531.7
nad/nadp-dependent betaine aldehyde dehydrogenase 1ACH61_03208Not AvailableNegative3095076 - 309578324013.3
aldehyde dehydrogenase puucACH61_03209Not AvailableNegative3095780 - 309626516417.6
hypothetical proteinACH61_03210Not AvailablePositive3096514 - 309751536122.4
murein dd-endopeptidase mepmACH61_03211Not AvailablePositive3097854 - 309835716284.8
hypothetical proteinACH61_03212Not AvailableNegative3098361 - 309896921337.0
hypothetical proteinACH61_03213Not AvailableNegative3099756 - 310065232369.1
inorganic pyrophosphataseACH61_03214Not AvailablePositive3101201 - 310169218311.5
peptidoglycan endopeptidase ripa precursorACH61_03215Not AvailableNegative3101774 - 310211512154.2
hypothetical proteinACH61_03216Not AvailablePositive3103112 - 31033698735.35

Displaying genes 3201 – 3210 of 3259 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.