Rathayibacter tanaceti

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Rathayibacter

Description

Rathayibacter tanaceti is a gram-positive bacterium characterized by its rod shape. It is notable for having a single replicon, which is indicative of its genomic organization. The strain is cataloged under the accession number LIIN00000000.1, providing a reference for researchers interested in studying its genetic and phenotypic properties. As a member of the Rathayibacter genus, R. tanaceti is likely involved in interactions with host plants, specifically those within the Asteraceae family, as indicated by the genus's known associations with plant pathogens. The ecological role of R. tanaceti may involve influencing plant health and development, which is an important aspect of understanding microbial interactions within agricultural ecosystems. Given its gram-positive nature, R. tanaceti may possess features such as a thick peptidoglycan layer, which could contribute to its resilience in various environments. This trait is common among bacteria that interact closely with plants, as it may protect them from environmental stresses. Overall, Rathayibacter tanaceti represents a specific lineage within microbial ecology that warrants further investigation, particularly regarding its potential impact on plant systems and agricultural practices. Understanding its biology could provide insights into managing plant health and addressing challenges related to crop production.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusRathayibacter
SpeciesRathayibacter tanaceti
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rathayibacter tanaceti


Gene Summary

Adenine Count

465881 bp

Thymine Count

461263 bp

Guanine Count

1127750 bp

Cytosine Count

1113990 bp

Genome Length

3168884 bp

Protein-coding Genes

3209 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinACH61_01739Not AvailablePositive1646137 - 164750148625.1
lipopolysaccharide biosynthesis protein wzxcACH61_01740Not AvailableNegative1647770 - 165043695305.2
hypothetical proteinACH61_01741Not AvailableNegative1650433 - 165190552384.2
gdp-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferaseACH61_01742Not AvailableNegative1651902 - 165306541910.3
udp-n-acetyl-d-mannosaminuronic acid transferaseACH61_01743Not AvailableNegative1653094 - 165375924507.8
putative glycosyltransferase epseACH61_01744Not AvailableNegative1653866 - 165474131518.9
putative glycosyltransferase epshACH61_01745Not AvailableNegative1654738 - 165576338208.9
alpha-d-kanosaminyltransferaseACH61_01746Not AvailableNegative1655760 - 165682737476.9
hypothetical proteinACH61_01747Not AvailableNegative1656824 - 165820350500.8
glycosyl transferases group 1ACH61_01748Not AvailableNegative1658193 - 165922736229.1

Displaying genes 1741 – 1750 of 3259 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.