Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | AB669_04715 | Not Available | Positive | 1125241 - 1125756 | 19786.9 |
| penicillin-binding protein | AB669_04720 | P44469 | Positive | 1125756 - 1127744 | 74000.3 |
| rod shape-determining protein roda | AB669_04725 | O83514 | Positive | 1127744 - 1129009 | 46777.4 |
| hypothetical protein | AB669_04730 | Not Available | Negative | 1129019 - 1130260 | 46593.4 |
| thymidine kinase | AB669_04735 | Q64YL9 | Positive | 1130374 - 1130955 | 21198.6 |
| hypothetical protein | AB669_04740 | Not Available | Positive | 1130976 - 1131779 | 29491.3 |
| dna helicase | AB669_04745 | Not Available | Negative | 1131776 - 1135120 | 129357.0 |
| transcriptional regulator | AB669_04750 | Not Available | Negative | 1135352 - 1136383 | 39004.3 |
| carbohydrate kinase | AB669_04755 | Not Available | Negative | 1136429 - 1137814 | 52145.9 |
| sugar isomerase | AB669_04760 | Q92S14 | Negative | 1137832 - 1139112 | 47174.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

