Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AB669_03890 | Not Available | Positive | 950269 - 951180 | 35598.9 |
| cytochrome c553 | AB669_03895 | Not Available | Positive | 951269 - 951997 | 26659.1 |
| alcohol dehydrogenase | AB669_03900 | Not Available | Negative | 952275 - 953300 | 37266.3 |
| l-fucose dehydrogenase | AB669_03905 | Not Available | Negative | 953300 - 954349 | 39189.1 |
| l-fucose mutarotase | AB669_03910 | Not Available | Negative | 954318 - 954680 | 14671.5 |
| fucose permease | AB669_03915 | P11551 | Negative | 954683 - 955951 | 45600.9 |
| beta-galactosidase | AB669_03920 | Not Available | Negative | 956019 - 958319 | 87330.0 |
| alpha-l-fucosidase | AB669_03925 | Q5RFI5 | Negative | 958491 - 960146 | 62596.7 |
| glycan metabolism protein ragb | AB669_03930 | Not Available | Negative | 960283 - 961908 | 61788.4 |
| collagen-binding protein | AB669_03935 | Not Available | Negative | 961934 - 964933 | 109596.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

