Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxyphosphogluconate aldolase | AB669_02800 | Q1IKD0 | Negative | 684915 - 685727 | 29277.5 |
| atp-dependent dna helicase recq | AB669_02805 | Not Available | Negative | 685815 - 688004 | 82067.4 |
| d-arabinose 5-phosphate isomerase | AB669_02810 | O67500 | Positive | 688096 - 689064 | 34460.0 |
| mannose-1-phosphate guanylyltransferase | AB669_02815 | Q01410 | Positive | 689079 - 690170 | 41043.1 |
| diaminopimelate decarboxylase | AB669_02820 | Q8A800 | Negative | 690239 - 691405 | 43562.8 |
| aspartate kinase | AB669_02825 | Not Available | Negative | 691724 - 693037 | 48546.3 |
| phosphoglucomutase | AB669_02830 | P18159 | Positive | 693373 - 695109 | 63585.1 |
| hypothetical protein | AB669_02840 | Not Available | Positive | 695867 - 696637 | 28012.2 |
| cytochrome c peroxidase | AB669_02845 | P55929 | Positive | 696639 - 697673 | 38071.1 |
| hypothetical protein | AB669_02850 | Not Available | Positive | 697741 - 698613 | 32152.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

