Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna amidotransferase | AB669_02700 | Q11R87 | Negative | 661593 - 661883 | 10952.2 |
| acyl-phosphate glycerol 3-phosphate acyltransferase | AB669_02705 | Not Available | Negative | 661880 - 662608 | 28220.5 |
| tryptophanyl-trna synthetase | AB669_02710 | Q7MT94 | Positive | 662791 - 663789 | 37855.2 |
| deoxynucleoside kinase | AB669_02715 | Q74HC2 | Positive | 663878 - 664492 | 23679.2 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | AB669_02720 | A6L9D4 | Positive | 664512 - 665300 | 29233.9 |
| hypothetical protein | AB669_02725 | Not Available | Positive | 665424 - 665966 | 20573.6 |
| hypothetical protein | AB669_02730 | Not Available | Positive | 666565 - 666996 | 16416.6 |
| ctp synthetase | AB669_02735 | Q11S24 | Positive | 667231 - 668847 | 59902.4 |
| preprotein translocase subunit yidc | AB669_02740 | A6L9D2 | Positive | 668868 - 670664 | 67653.3 |
| peptidase s9 | AB669_02745 | Not Available | Positive | 670851 - 673709 | 107022.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

