Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extradiol dioxygenase | AB669_02650 | Not Available | Positive | 652963 - 653379 | 15179.0 |
| nudix hydrolase | AB669_02655 | Not Available | Negative | 653441 - 653884 | 17174.3 |
| cation diffusion facilitator family transporter | AB669_02660 | Not Available | Negative | 653871 - 654803 | 35170.7 |
| aspartate aminotransferase | AB669_02665 | Q9SIE1 | Positive | 655024 - 656166 | 42099.0 |
| abc transporter | AB669_02670 | Q9JVR5 | Negative | 656279 - 657526 | 46263.2 |
| s-adenosylmethionine trna ribosyltransferase | AB669_02675 | A6GW82 | Positive | 657722 - 658771 | 39801.0 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | AB669_02680 | Q64P77 | Positive | 658856 - 659521 | 24999.0 |
| hypothetical protein | AB669_02685 | Not Available | Negative | 659892 - 660113 | 8601.69 |
| cob(i)yrinic acid a c-diamide adenosyltransferase | AB669_02690 | O34899 | Negative | 660199 - 660747 | 20846.2 |
| macrolide abc transporter atp-binding protein | AB669_02695 | O31711 | Negative | 660744 - 661502 | 27545.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

