Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase | AB669_02545 | Not Available | Negative | 630746 - 632605 | 69776.5 |
| dna polymerase iii subunit epsilon | AB669_02550 | Not Available | Negative | 632650 - 633603 | 36213.2 |
| transglutaminase | AB669_02555 | Not Available | Positive | 633789 - 635765 | 74708.4 |
| hypothetical protein | AB669_02560 | Not Available | Positive | 635762 - 637666 | 71686.2 |
| hypothetical protein | AB669_02565 | Not Available | Positive | 638276 - 639061 | 28979.5 |
| hypothetical protein | AB669_02570 | Not Available | Negative | 639058 - 639501 | 17039.1 |
| dna topoisomerase i | AB669_02575 | Q65N90 | Positive | 639666 - 641519 | 69225.1 |
| hypothetical protein | AB669_02580 | Not Available | Negative | 641512 - 641889 | 13960.0 |
| dna helicase | AB669_02585 | P38935 | Negative | 642034 - 643947 | 71503.2 |
| hypothetical protein | AB669_02590 | Not Available | Negative | 643997 - 644380 | 14575.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

