Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipase | AB669_02495 | P9WK86 | Positive | 617832 - 618950 | 39893.0 |
| 50s ribosomal protein l20 | AB669_02500 | B3ERW1 | Negative | 619031 - 619375 | 12965.0 |
| 50s ribosomal protein l35 | AB669_02505 | A6L9S4 | Negative | 619448 - 619648 | 7255.12 |
| translation initiation factor if-3 | AB669_02510 | Not Available | Negative | 619678 - 620247 | 21479.3 |
| threonyl-trna synthetase | AB669_02515 | Q11UK3 | Negative | 620265 - 622190 | 72916.9 |
| hypothetical protein | AB669_02520 | Not Available | Negative | 622377 - 623291 | 32853.6 |
| fe-s oxidoreductase | AB669_02525 | B9IRL0 | Negative | 623378 - 624115 | 27528.7 |
| mfs transporter permease | AB669_02530 | P42306 | Negative | 624145 - 625452 | 48472.4 |
| atp-dependent dna helicase recq | AB669_02535 | P15043 | Negative | 625476 - 627368 | 71952.1 |
| amidohydrolase | AB669_02540 | Not Available | Positive | 627443 - 630670 | 119013.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

