Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | AB669_02395 | Not Available | Negative | 597885 - 600863 | 107534.0 |
| anhydro-n-acetylmuramic acid kinase | AB669_02400 | Q15RS7 | Negative | 600895 - 602088 | 43286.7 |
| rna-binding protein | AB669_02405 | Q44264 | Negative | 602285 - 602686 | 15208.3 |
| 2,3,4,5-tetrahydropyridine-2,6-carboxylate n-succinyltransferase | AB669_02410 | Q6F9A5 | Positive | 602793 - 603611 | 29607.0 |
| mannosyltransferase | AB669_02415 | Not Available | Positive | 603711 - 604832 | 42454.5 |
| hypothetical protein | AB669_02420 | Not Available | Negative | 604835 - 605049 | 7872.37 |
| flagellar motor protein motb | AB669_02425 | P37665 | Positive | 605050 - 605736 | 24569.5 |
| magnesium transporter | AB669_02430 | Q5SMG8 | Negative | 605989 - 607338 | 49861.9 |
| cation transporter | AB669_02435 | Q9WZ31 | Negative | 607459 - 608580 | 43593.3 |
| hypothetical protein | AB669_02440 | Not Available | Negative | 608584 - 609195 | 24056.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

