Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | AB669_02195 | Not Available | Negative | 549697 - 550617 | 34456.4 |
| glycyl-trna synthetease | AB669_02200 | Q8KAB1 | Positive | 550709 - 552352 | 63433.2 |
| hypothetical protein | AB669_02205 | Not Available | Positive | 552521 - 553393 | 30797.8 |
| peptidase m48 | AB669_02210 | Not Available | Positive | 553557 - 554771 | 46910.7 |
| dna helicase | AB669_02215 | P75033 | Positive | 554824 - 560295 | 210388.0 |
| dna-binding protein | AB669_02220 | Not Available | Positive | 560487 - 560891 | 15717.8 |
| short-chain dehydrogenase | AB669_02225 | Q5HGK2 | Positive | 560979 - 561743 | 27124.7 |
| allergen v5/tpx-1 family protein | AB669_02230 | Not Available | Positive | 561873 - 562562 | 26535.7 |
| hypothetical protein | AB669_02235 | Not Available | Positive | 562640 - 563140 | 19603.5 |
| phenylalanine 4-monooxygenase | AB669_02240 | Not Available | Positive | 563300 - 565072 | 66622.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

