Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit seca | AB669_15085 | A6GX63 | Negative | 3568578 - 3571880 | 124038.0 |
| hypothetical protein | AB669_15090 | Not Available | Negative | 3572014 - 3572313 | 11160.6 |
| intradiol ring-cleavage dioxygenase | AB669_15095 | Not Available | Positive | 3572533 - 3573264 | 25459.6 |
| hypothetical protein | AB669_15100 | Not Available | Positive | 3573332 - 3573838 | 19670.7 |
| hypothetical protein | AB669_15105 | Not Available | Positive | 3573843 - 3574529 | 25836.9 |
| dna mismatch repair protein muts | AB669_15110 | Not Available | Negative | 3574586 - 3575539 | 35886.1 |
| gtpase rsga | AB669_15115 | Q8A5I9 | Negative | 3575581 - 3576501 | 34308.1 |
| chemotaxis protein chey | AB669_15120 | P14375 | Negative | 3576557 - 3577888 | 49257.5 |
| hypothetical protein | AB669_15125 | Not Available | Negative | 3577957 - 3578271 | 11203.4 |
| hypothetical protein | AB669_15130 | Not Available | Negative | 3578389 - 3578703 | 11268.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

