Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase | AB669_14935 | Q9WXE8 | Negative | 3531642 - 3533252 | 60018.1 |
| pectin esterase | AB669_14940 | Q9LVQ0 | Positive | 3533560 - 3534510 | 35469.6 |
| glycoside hydrolase | AB669_14945 | P27644 | Positive | 3534674 - 3536347 | 60407.7 |
| glucuronyl hydrolase | AB669_14950 | Not Available | Positive | 3536353 - 3538284 | 71669.4 |
| pectate lyase | AB669_14955 | Not Available | Positive | 3538408 - 3539385 | 36402.2 |
| altronate oxidoreductase | AB669_14960 | Q97L67 | Positive | 3539415 - 3540926 | 56439.6 |
| altronate hydrolase | AB669_14965 | O34673 | Positive | 3540930 - 3542576 | 59750.2 |
| glucuronate isomerase | AB669_14970 | Q8A9J2 | Positive | 3542666 - 3544066 | 53794.5 |
| carbohydrate kinase | AB669_14975 | Q53W83 | Positive | 3544181 - 3545236 | 38862.5 |
| ketohydroxyglutarate aldolase | AB669_14980 | Not Available | Positive | 3545229 - 3545891 | 24083.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

