Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginase | AB669_14575 | Not Available | Negative | 3446184 - 3447365 | 44882.7 |
| nucleoside-diphosphate sugar epimerase | AB669_14580 | P73212 | Positive | 3447437 - 3448399 | 35090.4 |
| phosphoserine phosphatase | AB669_14585 | Q54UH8 | Positive | 3448399 - 3449700 | 49550.4 |
| tryptophan 2,3-dioxygenase | AB669_14590 | B4UMQ6 | Positive | 3449737 - 3450702 | 37734.1 |
| branched-chain amino acid aminotransferase | AB669_14595 | P39576 | Positive | 3450848 - 3451912 | 39545.9 |
| hypothetical protein | AB669_14600 | Not Available | Negative | 3451990 - 3452454 | 17013.1 |
| dna repair protein rada | AB669_14605 | P37572 | Negative | 3452794 - 3454170 | 50384.9 |
| ribonuclease g | AB669_14610 | P45175 | Negative | 3454347 - 3455897 | 58763.6 |
| hypothetical protein | AB669_14615 | Not Available | Negative | 3456182 - 3457057 | 31082.3 |
| dna-binding protein | AB669_14620 | Q13VC5 | Negative | 3457067 - 3457369 | 11063.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

