Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein tyrosine phosphatase | AB669_14055 | P11064 | Negative | 3336659 - 3337093 | 16622.9 |
| s1/p1 nuclease | AB669_14060 | Q8LDW6 | Negative | 3337183 - 3337989 | 30641.1 |
| fumarate hydratase | AB669_14065 | Not Available | Negative | 3337991 - 3338467 | 18193.6 |
| hypothetical protein | AB669_14070 | Not Available | Negative | 3338543 - 3338884 | 12552.7 |
| fumarate hydratase | AB669_14075 | Q9CMK1 | Negative | 3339041 - 3340438 | 49712.9 |
| hypothetical protein | AB669_14080 | Q8E7H4 | Positive | 3341118 - 3342725 | 60721.6 |
| chemotaxis protein chey | AB669_14085 | Not Available | Positive | 3342727 - 3343470 | 27944.1 |
| hypothetical protein | AB669_14090 | Not Available | Positive | 3343557 - 3343850 | 11254.4 |
| arac family transcriptional regulator | AB669_14095 | Not Available | Negative | 3343859 - 3344755 | 34513.2 |
| aldo/keto reductase | AB669_14100 | Not Available | Negative | 3344825 - 3345829 | 36998.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

