Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | AB669_13855 | Q55EX9 | Negative | 3299445 - 3300176 | 28274.4 |
| hypothetical protein | AB669_13860 | Not Available | Negative | 3300294 - 3301136 | 31089.7 |
| gntr family transcriptional regulator | AB669_13865 | Not Available | Negative | 3301140 - 3301514 | 14789.9 |
| hypothetical protein | AB669_13870 | Not Available | Negative | 3301532 - 3302356 | 32167.7 |
| abc transporter atp-binding protein | AB669_13875 | O34641 | Negative | 3302362 - 3303189 | 31112.8 |
| oxidoreductase | AB669_13880 | Q63CC9 | Positive | 3303439 - 3304503 | 38932.0 |
| xylose isomerase | AB669_13885 | Q8A9M2 | Negative | 3304601 - 3305932 | 49953.4 |
| carbohydrate kinase | AB669_13890 | P35850 | Negative | 3305949 - 3307430 | 53934.4 |
| pp_02642 | AB669_13895 | Not Available | Positive | 3307556 - 3307891 | Not Available |
| cmp deaminase | AB669_13900 | Q99W51 | Positive | 3307956 - 3308423 | 17167.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

