Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol:disulfide interchange protein dsbd | AB669_12845 | Not Available | Positive | 3065126 - 3066808 | 60782.6 |
| 6-phosphofructokinase | AB669_12850 | Q8A624 | Positive | 3066810 - 3067793 | 35310.4 |
| hypothetical protein | AB669_12855 | Q8A295 | Negative | 3067826 - 3068152 | 11287.6 |
| 30s ribosomal protein s16 | AB669_12860 | A5FKD9 | Positive | 3068460 - 3069011 | 19587.0 |
| 16s rrna processing protein rimm | AB669_12865 | A6GWI5 | Positive | 3069159 - 3069686 | 20484.2 |
| trna (guanine-n1)-methyltransferase | AB669_12870 | A5FHV7 | Positive | 3069814 - 3070488 | 25025.0 |
| 50s ribosomal protein l19 | AB669_12875 | A6LEF2 | Positive | 3070796 - 3071143 | 13035.8 |
| mechanosensitive ion channel protein mscs | AB669_12880 | O66994 | Positive | 3071214 - 3072386 | 43724.7 |
| phosphatidylserine decarboxylase | AB669_12885 | Q11Y69 | Negative | 3072466 - 3073125 | 24896.2 |
| hypoxanthine phosphoribosyltransferase | AB669_12890 | P37472 | Negative | 3073183 - 3073725 | 20134.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

