Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine 5-carboxymethylaminomethyl modification protein | AB669_12690 | Q11PC8 | Positive | 3028837 - 3030699 | 69230.1 |
| acetyltransferase | AB669_12700 | Q9C6B3 | Negative | 3032564 - 3033073 | 18052.8 |
| l-aspartate oxidase | AB669_12705 | Q9KPA4 | Negative | 3033138 - 3034724 | 59673.1 |
| quinolinate synthetase | AB669_12710 | B7KBV9 | Positive | 3035175 - 3036173 | 36933.8 |
| sodium:proton antiporter | AB669_12715 | A0KMZ3 | Positive | 3036239 - 3037471 | 44000.1 |
| thiamine-monophosphate kinase | AB669_12720 | O05514 | Positive | 3037511 - 3038551 | 38212.6 |
| dna polymerase v | AB669_12725 | Q9I4U3 | Negative | 3038796 - 3040169 | 52207.4 |
| formyltetrahydrofolate deformylase | AB669_12730 | Q03432 | Positive | 3040360 - 3041199 | 31563.2 |
| membrane protein | AB669_12735 | Not Available | Positive | 3041348 - 3042043 | 25528.2 |
| dsba oxidoreductase | AB669_12740 | P39598 | Negative | 3042116 - 3042829 | 27023.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

