Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretion protein hlyd | AB669_12640 | Not Available | Negative | 3014437 - 3015516 | 38537.6 |
| transporter | AB669_12645 | Not Available | Negative | 3015525 - 3016844 | 48251.9 |
| transcriptional regulator | AB669_12650 | Not Available | Negative | 3016841 - 3017467 | 23681.9 |
| hypothetical protein | AB669_12655 | Not Available | Positive | 3017643 - 3017828 | 6697.21 |
| hypothetical protein | AB669_12660 | Not Available | Positive | 3017895 - 3018464 | 21356.9 |
| phospholipase | AB669_12665 | Q9RGS8 | Negative | 3018526 - 3020898 | 88927.6 |
| glycerophosphodiester phosphodiesterase | AB669_12670 | Not Available | Negative | 3021026 - 3021820 | 30541.8 |
| hypothetical protein | AB669_12675 | Not Available | Positive | 3022022 - 3025354 | 128023.0 |
| rrna maturation factor | AB669_12680 | Q11PC9 | Positive | 3025739 - 3026164 | 16535.9 |
| abc transporter | AB669_12685 | O06476 | Positive | 3026855 - 3028717 | 70589.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

