Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AB669_12590 | Not Available | Negative | 3005377 - 3005604 | 8811.71 |
| exodeoxyribonuclease iii | AB669_12595 | O26314 | Positive | 3005674 - 3006441 | 29578.3 |
| 5-formyltetrahydrofolate cyclo-ligase | AB669_12600 | Q89AD6 | Negative | 3006602 - 3007162 | 21403.1 |
| elongation factor p | AB669_12605 | B8FQ76 | Negative | 3007266 - 3007826 | 20935.7 |
| elongation factor p | AB669_12610 | Q3ATP1 | Negative | 3007928 - 3008488 | 21195.1 |
| alkyl hydroperoxide reductase | AB669_12615 | P21762 | Positive | 3008758 - 3009390 | 23484.6 |
| thioredoxin | AB669_12620 | Q38879 | Positive | 3009405 - 3009713 | 11542.8 |
| hypothetical protein | AB669_12625 | Not Available | Positive | 3009713 - 3009961 | 8994.81 |
| phosphoenolpyruvate carboxylase | AB669_12630 | Q0AH90 | Negative | 3010034 - 3012619 | 97966.6 |
| major facilitator transporter | AB669_12635 | P0AEJ1 | Negative | 3012881 - 3014428 | 55930.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

