Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AB669_12480 | Not Available | Positive | 2984899 - 2985399 | 19031.0 |
| d-alanyl-d-alanine dipeptidase | AB669_12485 | Q47749 | Negative | 2985440 - 2986117 | 25937.5 |
| alanine dehydrogenase | AB669_12490 | Q8CX61 | Negative | 2986211 - 2987437 | 44514.0 |
| atpase | AB669_12495 | O83845 | Negative | 2987504 - 2987926 | 16361.5 |
| chemotaxis protein chey | AB669_12500 | Not Available | Negative | 2988013 - 2989566 | 60596.6 |
| phosphohydrolase | AB669_12505 | P39651 | Positive | 2989675 - 2990898 | 46605.6 |
| udp-3-o-(3-hydroxymyristoyl) glucosamine n-acyltransferase | AB669_12510 | Q11WA1 | Positive | 2991021 - 2992097 | 38506.6 |
| hydroxymyristoyl-acp dehydratase | AB669_12515 | Q8A015 | Positive | 2992087 - 2993499 | 52119.4 |
| acyl-acp--udp-n- acetylglucosamine o-acyltransferase | AB669_12520 | Q9PEI5 | Positive | 2993499 - 2994284 | 28560.5 |
| abc transporter atp-binding protein | AB669_12525 | P19844 | Positive | 2994304 - 2994918 | 22865.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

