Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AB669_12430 | Not Available | Negative | 2974598 - 2974972 | 13519.9 |
| rna polymerase sigma factor | AB669_12435 | Not Available | Positive | 2975155 - 2975733 | 22406.7 |
| hypothetical protein | AB669_12440 | Not Available | Positive | 2975730 - 2976206 | 18116.0 |
| cold-shock protein | AB669_12445 | P54584 | Negative | 2976291 - 2976482 | 6928.29 |
| hypothetical protein | AB669_12450 | Not Available | Negative | 2976586 - 2977509 | 35107.0 |
| hypothetical protein | AB669_12455 | Not Available | Negative | 2977566 - 2978432 | 32270.9 |
| glutaminyl-trna synthetase | AB669_12460 | Not Available | Negative | 2978590 - 2981103 | 93857.7 |
| hypothetical protein | AB669_12465 | Not Available | Negative | 2981195 - 2982394 | 44756.6 |
| peptidase s13 | AB669_12470 | Not Available | Positive | 2982495 - 2983823 | 50258.5 |
| aminotransferase class i/ii | AB669_12475 | Not Available | Positive | 2983839 - 2984888 | 38802.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

