Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-dihydroxy-6-naphthoate synthase | AB669_12170 | Q5SI12 | Positive | 2916492 - 2917343 | 31846.4 |
| transcriptional regulator | AB669_12175 | Not Available | Negative | 2917391 - 2918095 | 26667.4 |
| histidine kinase | AB669_12180 | Not Available | Negative | 2918258 - 2920084 | 69244.6 |
| hypothetical protein | AB669_12185 | Not Available | Negative | 2920526 - 2920891 | 13479.7 |
| rna methyltransferase | AB669_12190 | Q3A2U5 | Positive | 2920962 - 2922140 | 44091.9 |
| transcriptional regulator | AB669_12200 | Not Available | Positive | 2923025 - 2923306 | 10633.8 |
| phosphohydrolase | AB669_12205 | P54168 | Positive | 2923382 - 2924026 | 24332.0 |
| hypothetical protein | AB669_12210 | Not Available | Positive | 2924108 - 2924635 | 20099.7 |
| radical sam protein | AB669_12215 | Not Available | Positive | 2924725 - 2925984 | 47775.9 |
| dna metabolism protein | AB669_12220 | Not Available | Positive | 2926030 - 2926794 | 29980.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

