Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosamine-6-phosphate deaminase | AB669_12120 | Not Available | Positive | 2902936 - 2904861 | 72654.5 |
| laci family transcriptional regulator | AB669_12125 | P37947 | Negative | 2904936 - 2905949 | 36913.7 |
| n-acetylglucosamine related transporter, nagx | AB669_12130 | Q3UDW8 | Negative | 2906005 - 2907165 | 43097.8 |
| glycoside hydrolase | AB669_12135 | O35015 | Negative | 2907232 - 2908773 | 58821.7 |
| hypothetical protein | AB669_12140 | Not Available | Positive | 2908977 - 2909879 | 34056.5 |
| atpase | AB669_12145 | Q1RJB3 | Negative | 2909893 - 2913624 | 142368.0 |
| acp s-malonyltransferase | AB669_12150 | P71019 | Negative | 2913715 - 2914596 | 31030.4 |
| gtp cyclohydrolase | AB669_12155 | A6LFE8 | Negative | 2914683 - 2915318 | 23927.9 |
| 6-pyruvoyl tetrahydrobiopterin synthase | AB669_12160 | Q5REZ5 | Negative | 2915331 - 2915741 | 15717.6 |
| purine phosphorylase | AB669_12165 | Not Available | Positive | 2915828 - 2916451 | 22606.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

