Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide pyrophosphatase | AB669_12015 | Q55320 | Positive | 2873395 - 2875053 | 61374.6 |
| methylmalonyl-coa mutase | AB669_12020 | Q5KUG0 | Positive | 2875234 - 2878605 | 125595.0 |
| fatty acid desaturase | AB669_12025 | Q9LF04 | Negative | 2878673 - 2879653 | 37819.4 |
| hypothetical protein | AB669_12030 | Not Available | Negative | 2879734 - 2879940 | 7868.44 |
| Trna-asp | Not Available | Not Available | Positive | 2882577 - 2882653 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 2882844 - 2882920 | Not Available |
| peptide chain release factor 1 | AB669_12050 | Q7MXT5 | Negative | 2883023 - 2884096 | 40150.9 |
| udp-2,3-diacylglucosamine hydrolase | AB669_12055 | B2FQP4 | Negative | 2884231 - 2884977 | 28850.5 |
| prolyl endopeptidase | AB669_12060 | P27028 | Positive | 2885128 - 2887254 | 79736.3 |
| ferredoxin-nadp reductase | AB669_12065 | A0LXL9 | Positive | 2887489 - 2888499 | 36781.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

