Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine sulfoxide reductase a | AB669_11810 | Q98JV5 | Negative | 2827520 - 2828011 | 18428.3 |
| l-lysine 6-aminotransferase | AB669_11815 | P63510 | Positive | 2828535 - 2829866 | 50411.7 |
| hypothetical protein | AB669_11820 | Not Available | Positive | 2829869 - 2830273 | 15167.6 |
| acyl-coa dehydrogenase | AB669_11825 | Q96329 | Negative | 2830306 - 2831667 | 50486.3 |
| glcnac-pi de-n-acetylase | AB669_11830 | P42981 | Negative | 2831730 - 2832446 | 26706.0 |
| glutathione peroxidase | AB669_11835 | Q9Z9N7 | Negative | 2832490 - 2832987 | 18814.5 |
| hypothetical protein | AB669_11840 | Not Available | Negative | 2833007 - 2833621 | 23582.8 |
| mfs transporter | AB669_11845 | O54408 | Positive | 2833732 - 2835939 | 83954.4 |
| fur family transcriptional regulator | AB669_11850 | A8FKI7 | Positive | 2836014 - 2836514 | 19352.2 |
| adenylosuccinate synthetase | AB669_11855 | A5FHR3 | Positive | 2836553 - 2837833 | 46864.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

