Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | AB669_11760 | B6YQE4 | Positive | 2817614 - 2818414 | 31196.7 |
| abc transporter permease | AB669_11765 | P44250 | Negative | 2818456 - 2819676 | 46274.6 |
| hypothetical protein | AB669_11770 | P40407 | Positive | 2819835 - 2821103 | 47087.0 |
| hypothetical protein | AB669_11775 | Not Available | Positive | 2821199 - 2821408 | 7706.02 |
| dna topoisomerase i | AB669_11780 | Q7T6X9 | Negative | 2821452 - 2822501 | 39754.0 |
| methionyl-trna formyltransferase | AB669_11785 | Q5L975 | Positive | 2822592 - 2823500 | 33333.5 |
| 4-amino-4-deoxychorismate lyase | AB669_11790 | Q92B90 | Negative | 2823554 - 2824393 | 31781.3 |
| pseudouridine synthase | AB669_11795 | O50310 | Negative | 2824397 - 2825425 | 39085.8 |
| hypothetical protein | AB669_11800 | Not Available | Positive | 2825517 - 2826545 | 36320.8 |
| 1-aminocyclopropane-1-carboxylate deaminase | AB669_11805 | Q9WY68 | Positive | 2826609 - 2827478 | 31834.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

