Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. BMA |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1502212 bp
Thymine Count
1496821 bp
Guanine Count
1000558 bp
Cytosine Count
1041043 bp
Genome Length
5040634 bp
Protein-coding Genes
4055 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfatase-modifying factor | AB669_11605 | I6Y8I5 | Positive | 2786890 - 2787855 | 36719.4 |
| dehydrogenase | AB669_11610 | Not Available | Positive | 2787888 - 2789207 | 48919.9 |
| thiamine biosynthesis protein apbe | AB669_11615 | O85292 | Positive | 2789214 - 2790206 | 36795.1 |
| xylose isomerase | AB669_11620 | P30147 | Positive | 2790235 - 2791155 | 34539.2 |
| thioesterase | AB669_11625 | P0A0Q8 | Positive | 2791547 - 2792068 | 19283.3 |
| sodium:proton antiporter | AB669_11630 | Not Available | Positive | 2792139 - 2793326 | 43831.4 |
| ubiquinol-cytochrome c reductase | AB669_11635 | Q91YJ3 | Negative | 2793355 - 2793759 | 15474.4 |
| short-chain dehydrogenase | AB669_11640 | O57314 | Positive | 2793900 - 2794694 | 28934.3 |
| phytanoyl-coa dioxygenase | AB669_11645 | Not Available | Positive | 2794905 - 2795711 | 30310.2 |
| cdp-alcohol phosphatidyltransferase | AB669_11650 | Not Available | Positive | 2795864 - 2796550 | 26240.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

